Other
Docking@Home
English
molecular-docking
drug-discovery
distributed-computing
autodock
boinc
chemistry
biology
agent
computational-chemistry
bioinformatics
gpu-acceleration
distributed-network
decentralized
Instructions to use OpenPeerAI/DockingAtHOME with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Docking@Home
How to use OpenPeerAI/DockingAtHOME with Docking@Home:
# No code snippets available yet for this library. # To use this model, check the repository files and the library's documentation. # Want to help? PRs adding snippets are welcome at: # https://github.com/huggingface/huggingface.js
- Notebooks
- Google Colab
- Kaggle
| """ | |
| setup.py - Python package setup for Docking@HOME | |
| Authors: OpenPeer AI, Riemann Computing Inc., Bleunomics, Andrew Magdy Kamal | |
| """ | |
| from setuptools import setup, find_packages, Extension | |
| from setuptools.command.build_ext import build_ext | |
| import sys | |
| import os | |
| # Read README for long description | |
| with open("README.md", "r", encoding="utf-8") as fh: | |
| long_description = fh.read() | |
| # Read requirements | |
| with open("requirements.txt", "r", encoding="utf-8") as fh: | |
| requirements = [line.strip() for line in fh if line.strip() and not line.startswith("#")] | |
| class CMakeExtension(Extension): | |
| def __init__(self, name, sourcedir=""): | |
| Extension.__init__(self, name, sources=[]) | |
| self.sourcedir = os.path.abspath(sourcedir) | |
| class CMakeBuild(build_ext): | |
| def run(self): | |
| for ext in self.extensions: | |
| self.build_extension(ext) | |
| def build_extension(self, ext): | |
| # CMake build logic here | |
| pass | |
| setup( | |
| name="docking-at-home", | |
| version="1.0.0", | |
| author="OpenPeer AI, Riemann Computing Inc., Bleunomics, Andrew Magdy Kamal", | |
| author_email="contact@docking-at-home.org", | |
| description="Distributed and Parallel Molecular Docking Platform", | |
| long_description=long_description, | |
| long_description_content_type="text/markdown", | |
| url="https://huggingface.co/OpenPeerAI/DockingAtHOME", | |
| project_urls={ | |
| "Bug Reports": "https://huggingface.co/OpenPeerAI/DockingAtHOME/discussions", | |
| "Documentation": "https://huggingface.co/OpenPeerAI/DockingAtHOME", | |
| "Source": "https://huggingface.co/OpenPeerAI/DockingAtHOME", | |
| "HuggingFace": "https://huggingface.co/OpenPeerAI/DockingAtHOME", | |
| }, | |
| packages=find_packages(where="python"), | |
| package_dir={"": "python"}, | |
| classifiers=[ | |
| "Development Status :: 4 - Beta", | |
| "Intended Audience :: Science/Research", | |
| "Topic :: Scientific/Engineering :: Chemistry", | |
| "Topic :: Scientific/Engineering :: Bio-Informatics", | |
| "License :: OSI Approved :: GNU General Public License v3 (GPLv3)", | |
| "Programming Language :: Python :: 3", | |
| "Programming Language :: Python :: 3.8", | |
| "Programming Language :: Python :: 3.9", | |
| "Programming Language :: Python :: 3.10", | |
| "Programming Language :: Python :: 3.11", | |
| "Operating System :: OS Independent", | |
| ], | |
| python_requires=">=3.8", | |
| install_requires=requirements, | |
| extras_require={ | |
| "dev": [ | |
| "pytest>=7.4.0", | |
| "pytest-cov>=4.1.0", | |
| "black>=23.7.0", | |
| "flake8>=6.1.0", | |
| "mypy>=1.5.0", | |
| "sphinx>=7.1.0", | |
| ], | |
| "gpu": [ | |
| "cupy>=12.0.0", | |
| ], | |
| }, | |
| entry_points={ | |
| "console_scripts": [ | |
| "docking-at-home=docking_at_home.cli:main", | |
| ], | |
| }, | |
| include_package_data=True, | |
| zip_safe=False, | |
| ) | |